Posts about books

Statistics Insights for Scientists and Engineers

My father was a engineer and statistician. Along with George Box and Stu Hunter (no relation) they wrote Statistics for Experimenters (one of the potential titles had been Statistics for Engineers). They had an interest in bringing applied statistics to the work of scientists and engineers and I have that interest also. To me the key trait for applied statistics is to help experimenters learn quickly: it is an aid in the discovery process. It should not be a passive tool for analysis (which is how people often think of statistics).

José Ramírez studied applied and industrial statistics at the University of Wisconsin – Madison with my father and George Box. And now has a book and blog on taking statistics to engineers and scientists

The book is primarily written for engineers and scientists who need to use statistics and JMP to make sense of data and make sound decisions based on their analyses. This includes, for example, people working in semiconductor, automotive, chemical and aerospace industries. Other professionals in these industries who will find it valuable include quality engineers, reliability engineers, Six Sigma Black Belts and statisticians.

For those who want a reference for how to solve common problems using statistics and JMP, we walk through different case studies using a seven-step problem-solving framework, with heavy emphasis on the problem setup, interpretation, and translation of the results in the context of the problem.

For those who want to learn more about the statistical techniques and concepts, we provide a practical overview of the underpinnings and provide appropriate references. Finally, for those who want to learn how to benefit from the power of JMP, we have loaded the book with many step-by-step instructions and tips and tricks.

Related: Highlights from George Box Speech at JMP conference Nov 2009Controlled Experiments for Software SolutionsMistakes in Experimental Design and InterpretationFlorence Nightingale: The passionate statistician

Stat Insights is a blog by José and Brenda Ramírez.

Analyzing and Interpreting Continuous Data Using JMP by José and Brenda Ramírez. view chapter 1 online.

[We] have focused on making statistics both accessible and effective in helping to solve common problems found in an industrial setting. Statistical techniques are introduced not as a collection of formulas to be followed, but as a catalyst to enhance and speed up the engineering and scientific problem-solving process. Each chapter uses a 7-step problem-solving framework to make sure that the right problem is being solved with an appropriate selection of tools.

William Kamkwamba on the Daily Show

Pointy haired bosses removed the video. Argh!

William Kamkwamba on the Daily show. I first posted about William’s great work in 2007 – Home Engineering: Windmill for Electricity. What a great example of what can be done by sharing scientific and engineering ideas with those who will make the effort to create workable solutions.

William has written a book on his life: The Boy Who Harnessed the Wind.

Related: Inspirational EngineerMake the World Betterposts on engineersposts on Africa

Home Engineering: Reading in Bed

Kindle Holder - read in bedPhoto of Kindle, with read-in-bed holder by Randall Munroe

By Randall Munroe, author of the great XKCD comic, The Pursuit of Laziness

Since I was a kid, I’ve been looking for the perfect way to read in bed.

I recently got a Kindle. I was intending to use it mainly as a mobile web browser, but I’ve surprised myself by using it to read an awful lot. And, with apologies to all the bibliophiles out there, I find the ergonomics better than a paperback. When snacking and reading, I can lay it flat on a table without the use of a book weight to hold it opened, and when lying in bed, I don’t have to keep moving it to read.

But it’s not perfect. There’s no way to hold it with a finger on the ‘next page’ buttons that doesn’t require a few muscles to hold it upright

I got out of bed one night, went to the closet, and got a steel coat hanger and some pliers. After a few minutes of twisting, I created this

Related: What Makes Scientists Different 🙂The Lazy Unreasonable ManHome Engineering: Windmill for Electricityposts on home engineering

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Science and Engineering Fiction

cover of The Ice Limit

We always hear of science fiction. But what about engineering fiction? Well I finished reading a book this weekend that was at least as much engineering fiction as science fiction: The Ice Limit by Douglas Preston and Lincoln Child. It was a fun read. I enjoy the books those two collaborate on.

I also finished reading another book recently. I recommend Panic in Level 4 by Richard Preston. He wrote The Hot Zone, which is also great. He writes what “literary nonfiction” or “creative nonfiction.” The book includes 2 stories on math, about the Chudnovsky brothers, and 4 on biological science stories. I believe they were all previously stories in the New Yorker.

Douglas Preston and Richard Preston are brothers. It is just a happy co-incidence I happened to read them both recently. I just noticed the last names were the same so I looked online to see if they were related. Here is a nice bit from Douglas Preston’s web site:

As they grew up, Doug, Richard, and their little brother David roamed the quiet suburbs of Wellesley, terrorizing the natives with home-made rockets and incendiary devices mail-ordered from the backs of comic books or concocted from chemistry sets.

After unaccountably being rejected by Stanford University (a pox on it), Preston attended Pomona College in Claremont, California, where he studied mathematics, biology, physics, anthropology, chemistry, geology, and astronomy before settling down to English literature.

Also I read Tyrannosaur Canyon by Douglas Preston a few months ago. I preferred it to Ice Limit actually (but it didn’t have the engineering fiction angle) just a fun thriller with some science fiction thrown in.

Related: Ebola Outbreak in Ugandascience booksWaterloo’s wizards of game theoryThe Best Science BooksMy favorite science fiction author Orson Scott Card

Beautiful Basics of Science

Natalie Angier’s recent book, The Canon, is a great overview of the world of science. The book gets a bit too carried away with being cute (A top-of-the-line radar can pinpoint the whereabouts of a housefly two kilometers away, although clearly this is a radar with far too much time on its hands), but overall is excellent. Such lines are find, in moderation, but this book has too many by a factor of 10 or 100. Some gems from the book:

page 19: Science is not a rigid body of facts. It is a dynamic process of discovery.

page 47: true happenstance bears a distinctive stamp, and until you are familiar with its pattern, you are likely to think it messier, more haphazard, than it is… it often makes people uncomfortable by not looking random enough.

page 92: while the different atoms are all about the same size – a tenth of a billionth of a meter across – they diverge in their mass, in the number of protons and neutrons with which their nucleus is crammed.

page 99: If you drag a comb through your dry hair, the comb will strip off millions of electrons from the outermost shells of the atoms of you coiffure.

The details are great (about a trillion electrons are involved when you get a small static electricity shock) and it is an excellent book for those interested in an overview of science that does not require in depth science education to follow. And yet with a good background in science the material presented is still plenty interesting.

Related: The Best Science BooksScience BooksScience Books 2007Parasite Rex

The Science of Gardening

Photo of a bee by Justin Hunter

The Science of Gardening

Linda Chalker-Scott, an associate professor at Washington State University, is the author of The Informed Gardener and producer of the column “Horticultural Myths.” In The Truth About Garden Remedies: What Works, What Doesn’t, and Why, Jeff Gillman, associate professor at the University of Minnesota, is just as rational and informative

Do go ahead and dig in soil improvements, Chalker-Scott advises, for vegetable gardens or annual flowerbeds, in which nutrients need replacing yearly. But there’s really no need to dig organic amendments—manure and peat moss, etc.—into landscapes that are permanent. Treat those plantings of trees and shrubs as if they were forest ecosystems, not agricultural fields—wood chips and decaying leaves on top, no tilling-in of fertilizer.

It must drive both authors nuts to hear people say, “I’m an organic gardener. I never use chemicals.” Everything on earth is composed of chemicals.

The last line calls to mind the recent Royal Society of Chemistry attempt to reclaim the word chemical from the advertising and marketing industries: £1,000,000 for 100% chemical free material. A good example for our scientific literacy posts.

Photo by Justin Hunter.

Related: Curious Cat Cool Garden ConnectionsResearchers Learn What Sparks Plant GrowthSave Money on Food with a GardenThe Science Barge

Ender in Exile by Orson Scott Card

cover of Ender in Exile

Ender in Exile by Orson Scott Card has just been published. It is the ninth book in the Ender Wiggen series that began with Ender’s Game (Hugo and Nebula book award winner). I love the Ender series and have a table showing the sequence of the books. The books have not been published in the order of events in the fictional world. Ender in Exile is directly follows Ender’s Game (which makes it 3rd in story order – since Ender’s Shadow took place concurrently with Ender’s Game).

You can listen to Orson Scott Card read from Ender in Exile.

I include this post because I enjoyed the book. It doesn’t really have much to do with science or engineering but here is a quote from the book (page 106): “Besides, that’s what science was – the sharing of information the pooling of knowledge. That’s my gene pool, Afriama, he thought. The meme pool, the collective knowledge of science. What I discover here, what I learn, the problems I solve – those will be my children.”

Enjoy the book, and if you have not read Ender’s Game I highly recommend it. You can read the original Ender’s Game short story online. And if you haven’t read The Investment Counselor (about Jane, Ender’s computer companion) it is excellent (included in First Meetings in Ender’s Universe)

Related: The Last Lecture (book)Science BooksParasite RexScience and Engineering Gadgets and GiftsCreate Your Own Book

Toward a More Open Scientific Culture

Michael Nielsen wrote a great post, The Future of Science, which is also the topic of a book he is writing. He discusses how scientific advancement has often been delayed as those making discoveries did not share them openly. And how 300 years ago scientific journals and reward systems created ways for scientists to be rewarded for publication. And he continues with the need for the process to again change and promote more open sharing of scientific knowledge, which I agree with and have written about previously: Publishers Continue to Fight Open Access to Science, Science Journal Publishers Stay Stupid, The Future of Scholarly Publication, etc..

Why were Hooke, Newton, and their contemporaries so secretive? In fact, up until this time discoveries were routinely kept secret.

This cultural transition was just beginning in the time of Hooke and Newton, but a little over a century later the great physicist Michael Faraday could advise a younger colleague to “Work. Finish. Publish.” The culture of science had changed so that a discovery not published in a scientific journal was not truly complete. Today, when a scientist applies for a job, the most important part of the application is their published scientific papers.

This has been a great advance. Now we need to continue that advance to use the internet to make that publication open and increase the advantage of shared knowledge to society.

The adoption of the journal system was achieved by subsidizing scientists who published their discoveries in journals. This same subsidy now inhibits the adoption of more effective technologies, because it continues to incentivize scientists to share their work in conventional journals, and not in more modern media.

This means: making many more types of content available than just scientific papers; allowing creative reuse and modification of existing work through more open licensing and community norms; making all information not just human readable but also machine readable; providing open APIs to enable the building of additional services on top of the scientific literature, and possibly even multiple layers of increasingly powerful services. Such extreme openness is the ultimate expression of the idea that others may build upon and extend the work of individual scientists in ways they themselves would never have conceived.

To create an open scientific culture that embraces new online tools, two challenging tasks must be achieved: (1) build superb online tools; and (2) cause the cultural changes necessary for those tools to be accepted.

I agree we need to take advantage of the new possibilities to advance the practice of science. His full post is well worth reading.

Related: Open Source: The Scientific Model Applied to ProgrammingThe Future of Science is Open by Bill HookerDinosaurs Fight Against Open ScienceOpen Access Journal WarsI Support the Public Library of ScienceDoes the Data Deluge Make the Scientific Method Obsolete?

The Rush to Save Timbuktu’s Crumbling Manuscripts

The Rush to Save Timbuktu’s Crumbling Manuscripts

Fabled Timbuktu, once the site of the world’s southernmost Islamic university, harbors thousands upon thousands of long-forgotten manuscripts. A dozen academic instutions from around the world are now working frantically to save and evaluate the crumbling documents.

The Ahmed Baba Library alone contains more than 20,000 manuscripts, including works on herbal medicine and mathematics, yellowed volumes of poetry, music and Islamic law. Some are adorned with gilded letters, while others are written in the language of the Tuareg tribes. The contents remain a mystery.

Manuscript hunters are now scouring the environs of Timbuktu, descending into dark, clay basements and climbing up into attics. Twenty-four family-owned collections have already been discovered in the area. Most of the works stem from the late Middle Ages, when Timbuktu was an important crossroads for caravans.

Archaeologists have shown that an incredible system of underground canals up to 20,000 kilometers (12,422 miles) long once existed at Wadi al-Hayat in Libya. Thanks to such hydraulic marvels, the desert blossomed and crops sprouted in the fields of the Tuareg.

Related: digital library of scholarly resources from and about AfricaAfrican Union Science Meeting

10 Most Beautiful Physics Experiments

Science’s 10 Most Beautiful Experiments by George Johnson

Galileo’s experiment on falling objects

In the late 1500’s, everyone knew that heavy objects fall faster than lighter ones. After all, Aristotle had said so. That an ancient Greek scholar still held such sway was a sign of how far science had declined during the dark ages.

Galileo Galilei, who held a chair in mathematics at the University of Pisa, was impudent enough to question the common knowledge. The story has become part of the folklore of science: he is reputed to have dropped two different weights from the town’s Leaning Tower showing that they landed at the same time. His challenges to Aristotle may have cost Galileo his job, but he had demonstrated the importance of taking nature, not human authority, as the final arbiter in matters of science.

Young’s double-slit experiment applied to the interference of single electrons

Though it is not simply made of particles, neither can it be described purely as a wave. In the first five years of the 20th century, Max Planck and then Albert Einstein showed, respectively, that light is emitted and absorbed in packets — called photons. But other experiments continued to verify that light is also wavelike.

It took quantum theory, developed over the next few decades, to reconcile how both ideas could be true: photons and other subatomic particles — electrons, protons, and so forth — exhibit two complementary qualities; they are, as one physicist put it, ”wavicles.”

Eratosthenes’ measurement of the Earth’s circumference -the librarian at Alexandria in the third century B.C. estimated the circumference of the planet

Assuming the earth is spherical, its circumference spans 360 degrees. So if the two cities are seven degrees apart, that would constitute seven-360ths of the full circle — about one-fiftieth. Estimating from travel time that the towns were 5,000 ”stadia” apart, Eratosthenes concluded that the earth must be 50 times that size — 250,000 stadia in girth.

Related: Book, The Ten Most Beautiful Experiments by George Johnson (not the same experiments) – Home Experiments: Quantum ErasingParticles and Wavestheory of knowledgescientific experiments

Bananas Going

photo of a baboon eating bananas and holding a kitten

I posted on the threat of extinction for bananas. Dan Koeppel has written an excellent book, Banana: The Fate of the Fruit That Changed the World. He also has a great Banana blog with serious and fun posts:

Urgent threat to Africa’s Bananas:

In Uganda, meanwhile, the disease has become so widespread that yields on banana farms have reached dangerously low levels. Acres and acres of crops have been lost, creating a cascade of economic losses in a trading system that spreads from the tiniest villages to Uganda’s cities, all based on the transport and trade of bananas.

The urgency of this cannot be overstated. Uganda and the nations surrounding it absolutely depend on bananas as a staple foodstuff. Millions rely on bananas for survival. And the spread of BXW into Kenya is yet another indicator that this deadly disease is on the march. As with Panama Disease – the wilting fungus that threatens our banana, the Cavendish – BXW (a bacterial malady) is incurable. The difference between the two is that BXW moves faster and threatens, right now, food supplies in nations with fragile governments.

First, banana diversity. In order to mitigate the spread of disease, the number of kinds of bananas being grown needs to be increased.

Second, genetic engineering: It is time for the general public to recognize that working at the DNA level is not always a corporate trojan horse into destroying local agriculture and contaminating the environment. This isn’t all about Monsanto. While consumers in the suburbs and Whole Foods stores protest against all GMO foods – while barely knowing what GMO is – they bluntly prevent out legitimate public research that might stop hunger. Time learn that everything has nuance, the disease that are killing the bananas: they work in just two modes: off – and on.

The photos is from a fun post: Baboon Prefers Bananas over Kittens. Thank Goodness.

Related: Plumpynut a Food SaviorThe Avocadoposts on foodWheat Rust ResearchArctic Seed Vault

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