I have posted before about the overfishing problems: Fishless Future - SelFISHing - Chinook Salmon Vanish Without a Trace. Here is an emotional article on the problem - How the world’s oceans are running out of fish
| Platypus Genome Found Fittingly Strange by Rick Weiss
a team of scientists has determined the platypus’s entire genetic code. And right down to its DNA, it turns out, the animal continues to strain credulity, bearing genetic modules that are in turn mammalian, reptilian and avian.
There are genes for egg laying — evidence of its reptilian roots. Genes for making milk, which the platypus does in mammalian style despite not having nipples. Genes for making snake venom, which the animal stores in its legs. And there are five times as many sex-determining chromosomes as scientists know what to do with. “It’s such a wacky organism,” said Richard Wilson, director of the Genome Sequencing Center at Washington University in St. Louis, who with colleague Wesley Warren led the two-year effort, described today in the journal Nature. Yet in its wackiness, Wilson said, the platypus genome offers an unprecedented glimpse of how evolution made its first stabs at producing mammals. It tells the tale of how early mammals learned to nurse their young; how they matched poisonous snakes at their venomous game; and how they struggled to build a system of fertilization and gestation that would eventually, through relatives that took a different tack, give rise to the first humans. “As we learn more about things like platypuses,” Wilson said, “we also learn more about ourselves and where we came from and how we work.” |
Very cool stuff. Related: Platypus genome explains animal’s peculiar features; holds clues to evolution of mammals - Platypus genome mapping boon for human and livestock researchers - Platypus genetic code unravelled - Weird Creatures - Evolution is Fundamental to Science - Long-Eared Jerboa - Cat Joins Exclusive Genome Club - Your Inner Fish
Wash Your Clothes: Elephants Can Smell You a Mile Away
The researchers observed elephants exposed to the scent from identical cloth garments, some worn by Maasai men, others by Kamba men and some that were unworn. The Maasai scent produced the strongest reactions, with elephants moving farther and faster to distance themselves from the odor source, often not stopping until reaching tall grass. The elephants also took far longer to calm down than those exposed to scents from the Kamba and unworn cloths.
Related: Fighting Elephant Poaching With Science - Effect of People on Other Species - Water Buffaloes, Lions and Crocodiles Oh My - Curious Cat Travel Photos: Kenya
McGill study links breastfeeding to increased intelligence
The largest randomized study of breastfeeding ever (14,000 children for 6.5 years) conducted reports that breastfeeding raises children’s IQs and improves their academic performance, a McGill researcher and his team have found.
“Our study provides the strongest evidence to date that prolonged and exclusive breastfeeding makes kids smarter,” said Kramer, a Professor of Pediatrics and of Epidemiology & Biostatistics in the McGill University Faculty of Medicine and lead investigator in the study.
Kramer and his colleagues evaluated the children in 31 Belarusian hospitals and clinics. Half the mothers were exposed to an intervention that encouraged prolonged and exclusive breastfeeding. The remaining half continued their usual maternity hospital and outpatient pediatric care and follow-up. This allowed the researchers to measure the effect of breastfeeding on the children’s cognitive development without the results being biased by differences in factors such as the mother’s intelligence or her way of interacting with her baby.
The children’s cognitive ability was assessed by IQ tests administered by the children’s pediatricians and by their teachers’ ratings of their academic performance in reading, writing, mathematics and other subjects. Both sets of measures were significantly higher in the group randomized to the breastfeeding promotion intervention.
“The effect of breastfeeding on brain development and intelligence has long been a popular and hotly debated topic,” says Dr. Kramer. “While most studies have been based on association, however, we can now make a causal inference between breastfeeding and intelligence – because of the randomized design of our study.”
Related: Brain Development - How The Brain Rewires Itself - The Brain is Wired to Mull Over Decisions - Breast-feeding called smart choice
Molecular Action May Help Keep Birds on Course
If the hypothesis is true, the planet’s magnetic field lines — which arch around Earth from north to south — may be plainly visible to birds, like the dashed line in the middle of a road.
The work, described online yesterday in the journal Nature, was conducted in a test tube and does not prove that birds actually use the mechanism. And researchers aligned with a competing model say they are not convinced.
But by identifying for the first time a molecule that reacts to very weak magnetic fields, the experiments prove the plausibility of a long-hypothesized method of avian navigation that has had a credibility problem because no one had ever found a molecule with the required sensitivity.
Related: Monarch Butterfly Migration - Mini Helicopter Masters Insect Navigation Trick - Other bird tagged posts
Fat cell number is set in childhood and stays constant in adulthood
The message is especially stark following the recent Foresight report, which estimated that if current trends are left unchecked, by 2050 a quarter of all UK children under the age of 16 will be obese. The knowledge that their fat cell count will then be set for life makes the cost of inaction even higher. Fortunately, it seems that the UK Government is taking appropriate steps and recently pledged over a third of a billion pounds on a concerted strategy to tackle childhood obesity.
Related: $500 Million to Reduce Childhood Obesity in USA - Obesity Epidemic Explained - Kind Of - Drinking Soda and Obesity

The last few days a bird like this one has been chasing a crow in my yard (unfortunately I have not been able to get an action picture of that). If you know what type of bird this is please add a comment.
When I see robins pecking away in the grass sometimes I see them get worms but my guess is they often are eating other stuff. I also see starlings feeding on my lawn. I found some online links that I quote below on what robins and starlings eat.
Related: Backyard Wildlife: Sharpshinned Hawk - Cool Crow Research - Backyard Wildlife: Fox - Backyard Wildlife: Turtle
Cornell University: American Robin
History And Biology Of European Starlings In North America
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1.1 Million Bee Colonies Dead This Year
The survey found that about 35% of all the colonies in the U.S. died last winter. Of those that died, 71% died of natural causes, 29% from symptoms that are suspect colony collapse disorder. Doing the math that comes to at least 10% of all the bees in the U.S. last year died of Colony Collapse Disorder.
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Considering all these factors, undue concern over IAPV detection is not warranted. While IAPV’s role in colony losses remains a priority in ongoing research, we do know that high levels of other common bee viruses, such as KBV, DWV, and ABPV, have also been linked with certain incidences of high colony mortality or decline in worker numbers. We also know that nearly all bee colonies are infected with at least one type of virus and that all these viruses are potentially pathogenic.
The research continues. As I have said before this is a great example of scientists in action trying to figure out what is happening.
Related: The Study of Bee Colony Collapses Continues - Bye Bye Bees - Scientists Search for Clues To Bee Mystery

By the end of the summer, the number of reported nests increased to more than 80. Auburn researcher Dr. Charles Ray speculates there probably were hundreds more undetected nests throughout the state. One nest collector spotted 10 of these nests in Lowndes County alone, while an Alabama Cooperative Extension System agent in Covington County reported as many as 25 nests.
Why were these gigantic nests considered such oddities? Because entomologists such as Ray could go an entire career without seeing scarcely one of these huge nests. This year, though, the nests seem to have vanished as quickly as dissipating clouds. Working closely with Alabama Extension agents and other monitors throughout the state, Ray hasn’t turned up so much as one nest this year.
“The summer of 2006 may prove to be a once in a lifetime opportunity,” say Ray, who considers the discovery of the nests one of the high points of his career. So what accounts for this once in a lifetime occurrence? Ray speculates it had to do with an unusually mild 2006 winter. “The mid-20s was about as cold as it got that year - only about a day or two of really cold weather,” says Ray, adding that this extremely mild winter probably established optimal conditions for the yellow jackets the following spring.
Related: Giant Wasp Nests - 24 hectare Spider Web - Wasps Used to Detect Explosives
Clinton and Obama parrot the “vaccine and autism connection inconclusive” line by Tara C. Smith:
The National Children’s Study will examine the effects of environmental influences on the health and development of more than 100,000 children across the United States, following them from before birth until age 21. The goal of the study is to improve the health and well-being of children.
Variables examined will include vaccinations received, and development of autism will be one of the outcomes examined. What more can you ask for? Obama and Clinton’s claims of ignorance on the part of the scientific community when it comes to vaccines and autism show that we don’t have any real science defenders in the running.
Related: Scientists and Engineers in Congress - Science and Engineering in Politics - The A to Z Guide to Political Interference in Science

Orangutan attempts to hunt fish with spear:
Cool. The photos is from a new book on orangutans, The Thinkers Of The Jungle, which also includes the first photograph of an orangutan swimming.
Related: Borneo Orangutan Survival Foundation UK - Bornean Clouded Leopard - Savanna Chimpanzees Hunt with Tools - First Lungless Frog Found in Borneo - Chimps Used Stone “Hammers” - more fun posts on the blog
By increasing the production of wheat it is said Norman Borlaug has saved more lives than anyone else who ever lived, for which he was awarded the 1970 Nobel Peace Prize. See his New York Times opinion piece: Stem Rust Never Sleeps
In the last decade, global wheat production has not kept pace with rising population, or the increasing per capita demand for wheat products in newly industrializing countries. At the same time, international support for wheat research has declined significantly. And as a consequence, in 2007-08, world wheat stocks (as a percentage of demand) dropped to their lowest level since 1947-48. And prices have steadily climbed to the highest level in 25 years.
The new strains of stem rust, called Ug99 because they were discovered in Uganda in 1999, are much more dangerous than those that, 50 years ago, destroyed as much as 20 percent of the American wheat crop. Today’s lush, high-yielding wheat fields on vast irrigated tracts are ideal environments for the fungus to multiply, so the potential for crop loss is greater than ever.
If publicly financed international researchers move together aggressively and systematically, high-yielding replacement wheat varieties can be developed and made available to farmers before stem rust disease becomes a global epidemic.
The Bush administration was initially quick to grasp Ug99’s threat to American wheat production. In 2005, Mike Johanns, then secretary of agriculture, instructed the federal agriculture research service to take the lead in developing an international strategy to deal with stem rust. In 2006, the Agency for International Development mobilized emergency financing to help African and Asian countries accelerate needed wheat research.
But more recently, the administration has begun reversing direction. The State Department is recommending ending American support for the international agricultural research centers that helped start the Green Revolution, including all money for wheat research. And significant financial cuts have been proposed for important research centers, including the Department of Agriculture’s essential rust research laboratory in St. Paul.
This shocking short-sightedness goes against the interests not only of American wheat farmers and consumers but of all humanity. It is tantamount to the United States abandoning its pledge to help halve world hunger by 2015.
Related: Diplomacy and Science Research - Five Scientists Who Made the Modern World - 2004 Medal of Science Winners - U.S. Slipping on Science
Related: Ministry of Silly Walks - Treadmill Desks

Bacteriophages: The Most Common Life-Like Form on Earth
Photo credit: Wikipedia Electron micrograph of bacteriophages attached to a bacterial cell. These viruses have the size and shape of coliphage T1.; Insert: Mike Jones
Related: webcast of Bacteriophage T4 - types of microbes - What are Viruses? - Amazing Science: Retroviruses - Using Bacteria to Carry Nanoparticles Into Cells
No sex for all-girl fish species
Dr Laurence Loewe, of the university’s School of Biological Sciences, said: “What we have shown now is that this fish really has something special going on and that some special tricks exist to help this fish survive. “Maybe there is still occasional sex with strangers that keeps the species alive. Future research may give us some answers.”
He added that their findings could also help them understand more about how other creatures operate. “I think one of the interesting things is that we are learning more about how other species might use these tricks as well,” he said. “It might have a more general importance.”
Related: Female Sharks Can Reproduce Alone - Only Dad’s Genes - Bdelloid Rotifers Abandoned Sex 100 Million Years Ago - Sex and the Seahorse - more posts about fish
Expressing Our Individuality, the Way E. Coli Do by Carl Zimmer
In our noses, nerve cells can choose among hundreds of different kinds of odor receptors. Each cell picks only one, and evidence suggests that the choice is controlled by the unpredictable bursts of proteins within each neuron. It’s far more economical to let noise make the decision than to make proteins that can control hundreds of individual odor receptor genes.
Identical genes can also behave differently in our cells because some of our DNA is capped by carbon and hydrogen atoms called methyl groups. Methyl groups can control whether genes make proteins or remain silent. In humans (as well as in other organisms like E. coli), methyl groups sometimes fall off of DNA or become attached to new spots. Pure chance may be responsible for changing some methyl groups; nutrients and toxins may change others.
Related: Androgenesis - Sick spinach: Meet the killer E coli - Parasite Rex
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